Genomics, and precision health approaches such as big data science and machine learning have emerged as important tools for public health. Those entering the public health and medical workforces must keep pace with these evolving fields to maximize the benefit to public health. Recognizing this need, ORISE is partnering with the Office of Genomics and Precision Public Health at the CDC to offer a two-day enrichment event covering the latest developments in these fields. The course is a series of 15-60 minute lectures, grouped by topic, with learning objectives for each lecture.
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Training Level
Authored by
- PHII
- PHII Informatics Academy
- APHL
- CSTE
- HL7
- CDC
- ONC
- AIRA
- Altarum
- Public Health FHIR Implementation Collaborative (CDC/Mitre)
- Public Health Foundation
- SNOMED
- ASTHO
- AuDigitalHealth
- LOINC
- NewSteps
- NIH
- Sequoia Project
- TN Department of Health
- University of Utah
- (-) INBSI
- (-) J Michael Consulting
- (-) ORISE
Format
Intended Audience
Catalog
Genomics and Precision Public Health Training Course
Presentation
LOINC & NBS INBSI
Presentation
In the LOINC Primer for Newborn Screening we provide an introduction to LOINC, with a focus on its applications in the newborn screening space. We review how LOINCs are made, how to find the right code for your specific test, and a few cases of what not to do.
Year released: 2022
Duration: 18 Minutes
Logic Modeling
Presentation
An introduction to logic modeling and how it may be used by public health programs.
Year released: 2022
Duration: 17 minutes
Interoperability- Overcoming the Overwhelming
Presentation
In this presentation we hear from Laura Pabst who leads birth defects and neonatal abstinence syndrome surveillance at CDC. This episode follows her journey into the work of interoperability and her hopes for the future of interoperability.
Year released: 2022
Duration: 15 minutes
An Overview of the Onboarding Process
Presentation
In this presentation, we will go over the process for onboarding a data submitter for HL7-based interoperability.
Year released: 2022
Duration: 10 Minutes
The Interoperability Testing Process
Presentation
This presentation will describe why testing is critical to the success of an interoperability project. We will review the different types of testing that are commonly performed during a project in more detail. Also, we will provide some tips and tricks to make your testing more successful.
Year released: 2022
Duration: 27 Minutes
Introduction to lab orders (LOI) and results (LRI) IGs
Presentation
This presentation reviews the history of the laboratory orders (LOI) and results (LRI) implementation guides in general, some of the common aspects shared between them and how these standards are used together
Year released: 2022
Duration: 23 Minutes
Common features to lab orders (LOI) and results (LRI) IGs
Presentation
This presentation discusses how the laboratory orders (LOI) and results (LRI) implementation guides are written and some of the ways they are different from other v2 standards.
Year released: 2022
Duration: 14 Minutes
Vocabulary for lab orders (LOI) and results (LRI) IGs
Presentation
This presentation discusses how the values sets used by the laboratory orders (LOI) and results (LRI) implementation guides are documented.
Year released: 2022
Duration: 11 Minutes
Lab orders (LOI) messages
Presentation
This presentation describes the use cases encompassed by the laboratory orders (LOI) implementation guide and details some of the unique features of the profiles defined in the standard.
Year released: 2022
Duration: 31 Minutes
Lab results (LRI) concepts
Presentation
This presentation describes the use case encompassed by the laboratory results (LRI) implementation guide and details some of the unique concepts in the standard including snapshot mode and parent-child linkages
Year released: 2022
Duration: 17 Minutes
Lab Results (LRI) profiles
Presentation
This presentation describes some of the technical constraints included in the profiles used by the laboratory results (LRI) implementation guide.
Year released: 2022
Duration: 26 Minutes
Touring the HL7 V2 Message
Course
The goal of this course is to help orient new informaticians to the HL7 V2 message structure and take a deep dive into message content.
Year released: 2022
Introduction to HL7 Study Guide
Presentation
In this training, we'll cover interoperability, the background and history of HL7, and the main HL7 standards that are used in public health. By the end of this video, you will be able to: define interoperability, distinguish between syntactic and semantic interoperability, examine the history
Year released: 2021
Duration: 14 Minutes
Newborn Screening Interoperability Standards
Presentation
In this presentation, we will define use case in an implementation guide, go over an HL7 v2 message, and review each of the newborn screening standards that exist today.
Year released: 2021
Duration: 25 Minutes
Change Management and Stakeholder Engagement for Interoperability Efforts in Newborn Screening
Presentation
Year released: 2021
Duration: 52 Minutes
NIST - General Validation Tool
Presentation
Year released: 2021
Duration: 13 Minutes
Using the NIST v2 authoring and validation tools
Presentation
In this presentation, we provide an overview of the suite of tools developed by the National Institute for Standards and Technology to document v2 standards & test cases and to validate test messages against those requirements.
Year released: 2021
Duration: 7 Minutes
How to Read a v2 Implementation Guide - Profiles
Presentation
In this presentation, we will see how IG authors use profiles to add specific rules and constraints to the base standard to achieve the goals of the IG's use case.
Year released: 2021
Duration: 24 Minutes
How to Read a v2 Implementation Guide - Vocabulary and Data Types
Presentation
In this presentation, we will examine some building blocks of the v2 IG, vocabulary, and data types.
Year released: 2021
Duration: 17 Minutes
How to Read a v2 Implementation Guide - Setting the Context
Presentation
In this presentation, we will look at the first sections of a v2 implementation guide to see how the documents set the context for interoperability.
Year released: 2021
Duration: 11 Minutes
Acknowledgment Messages - Part 3
Presentation
This video presentation reviews how the authors of the existing newborn screening implementation guides describe the use of Acknowledgment messages. We also discuss the use of common error codes as a way to simplify addressing errors in processing.
Year released: 2021
Duration: 19 Minutes
Acknowledgment Messages - Part 2
Presentation
This video presentation goes into more detail about how the HL7 v2 standard permits the use of Acknowledgment messaging. We also look at how the use of intermediaries impacts Acknowledgment message flow.
Year released: 2021
Duration: 25 Minutes
Acknowledgment Messages - Part 1
Presentation
This video presentation introduces the idea of using HL7 v2 Acknowledgment messages to communicate with data submitters. Acknowledgments are an important way to let submitters know when a message is processed and if any errors were encountered during processing.
Year released: 2021
Duration: 21 Minutes
Project US@
Presentation
Year released: 2021
Duration: 7 Minutes
The ISA
Presentation
This short presentation describes the ONC's Interoperability Standards Advisory and how it gets updated
Year released: 2021
Duration: 7 Minutes
FHIR Resource Walk Through
Presentation
This video presentation will explore the details of how FHIR resources are defined and used. We'll walk through examples to see how the FHIR standard is implemented to exchange real-world data.
Year released: 2021
Duration: 29 Minutes
Introduction to FHIR
Presentation
This video presentation will review the latest HL7 interoperability standard, FHIR. We'll put FHIR into context relative to other HL7 products and examine how FHIR defines resources to represent a variety of different healthcare entities and events. We'll also discuss how Public Health programs
Year released: 2021
Duration: 18 Minutes
The HL7 Product Families
Presentation
In this presentation, we will be introducing the different HL7 product families that are used to exchange clinical data.
Year released: 2021
Duration: 12 Minutes
Structure of a v2 HL7 message
Presentation
In this presentation, we will discuss the different message types and their trigger events. Then we will go over the structure of an HL7 Version 2 message.
Year released: 2021
Duration: 15 Minutes
Navigating the v2 Base Standard
Presentation
n this presentation we will explore the location, organization and content of the v2 base standard.
Year released: 2021
Duration: 26 Minutes
What is HL7?
Presentation
In this presentation, we will describe the purpose and organization of the Health Level 7 (HL7) standards development organization
Year released: 2021
Duration: 12 Minutes
Introduction to Standards
Presentation
In this presentation, we will give an introduction to standards. We review what standards are, why they are important, and how they are developed and implemented.
Year released: 2021
Duration: 9 Minutes
Introduction to Interoperability
Presentation
In this presentation, we introduce interoperability. We define important terms and building blocks for achieving interoperability in Newborn Screening programs.
Year released: 2021
Duration: 13 Minutes